Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs76180457 chr8:24967438 G/C 1.05E-11 284 26.38 19.9 9.77 KM Plot
KIRP rs76192704 chr2:47144394 C/G 2.19E-7 289 25.37 34.43 10.97 KM Plot
KIRP rs76217952 chr18:75529166 T/A 3.44E-5 282 26 23.8 3.73 KM Plot
KIRP rs76269659 chr21:44271947 C/A 0.000143 287 25.58 40.7 13.07 KM Plot
KIRP rs76271836 chr21:44263321 G/A 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs76303575 chr3:124495727 A/G 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs76312094 chr16:8709447 TA/T 5.53E-5 289 5.72 34.3 25.53 KM Plot
KIRP rs76331014 chr12:69814192 A/G 0.000102 276 25.67 29.5 10.23 KM Plot
KIRP rs7634104 chr3:16022487 G/C 8.96E-6 281 26.3 28.57 23.08 KM Plot
KIRP rs7635564 chr3:16048100 G/A 6.9E-5 282 20.4 26.57 25.58 KM Plot
KIRP rs76369963 chr12:49893177 G/A 4.76E-6 286 25.6 37.25 10.97 KM Plot
KIRP rs76403628 chr17:80764955 T/A 7.21E-9 281 25.6 30.92 14.78 KM Plot
KIRP rs76411816 chr10:43465077 T/A 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs7641309 chr3:154069600 G/A 7.19E-5 287 25.93 26 20 KM Plot
KIRP rs7644252 chr3:154046336 C/T 8.39E-5 287 25.93 24.82 18.2 KM Plot